SpatialDraw brings the leading spatial transcriptomics platforms into one interactive workspace. Load your data, draw the region you care about, and let an AI assistant help you read the biology. No code required.
Multi-channel immunofluorescence overlay with DAPI, PolyT, pTau and Aβ channels. Human brain tissue with AD protein markers on Ultra.
Spatial Molecular Imaging with single-molecule sensitivity. Multi-channel immunofluorescence with FOV-based stitching. Pancreatic tissue.
Sequencing-based spatial transcriptomics at 2 µm bin resolution with H&E histology overlay. Breast, colon and pancreas.
In situ imaging with subcellular transcript localization. H&E and immunofluorescence overlay for subcellular resolution analysis.
Compare datasets across platforms, with differential expression, pathway scoring and AI-assisted discovery across everything you load.
Whole transcriptome profiling on morphologically defined regions. Uncover the pathways driving disease progression, immune response and cell state transitions within precisely selected tissue regions.
The most widely adopted spatial platform, with extensive published datasets in Alzheimer's disease and neurodegeneration. Explore cell–cell communication across existing Visium studies in public repositories.
Nanoscale spatial transcriptomics. Access published Stereo-seq datasets, including whole-embryo atlases and organ-scale maps.
Bead-based spatial transcriptomics at 10 µm resolution. Published brain, kidney and other tissue datasets from the Broad Institute and collaborators.
Cell types appear as soon as your data loads, and you stay in control of every label.
Draw a region and map ligand–receptor signaling across it.
Trace how gene expression shifts within and between the regions you define.
An AI assistant helps interpret results and points you to supporting literature.
High-resolution exports with immunofluorescence composites, expression overlays and region annotations.
The same tools and exports, whatever instrument generated your data.
Put two samples or regions next to each other and find what differs.
DAPI, PolyT and protein channels with adjustable opacity and colormaps.
Save complete sessions and return to them anytime.
Interested in a demo, a collaboration, or licensing SpatialDraw? We'd love to hear from you.